Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
301
candidate regulatory elements
172
target gene predictions
160
chromatin state
56
accessible chromatin
18
binding sites
16
gene expression
13
histone modifications
12
Fine-mapped variants
12
eQTL
12
variant allelic effects
2
caQTL
1
differential activity
Date released
453
September, 2022
183
February, 2021
20
November, 2021
16
February, 2024
16
June, 2020
16
March, 2020
11
May, 2020
11
May, 2021
10
February, 2020
8
January, 2020
7
October, 2022
4
August, 2017
4
January, 2022
4
March, 2024
3
April, 2020
3
May, 2022
2
May, 2019
2
November, 2019
1
August, 2021
1
October, 2019
Available data
580
bed bed3+
156
bed bed9
35
bigWig
27
tsv
5
bigBed bed9
Organism
775
Homo sapiens
Biosample type
568
tissue
120
cell line
85
primary cell
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
752
AMP
20
ENCODE
3
LungMap
Genome assembly (visualization)
759
hg19
211
GRCh38
BIOSAMPLE
TYPE
775 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
Fine-mapped variants
eQTL
variant allelic effects
caQTL
differential activity
tissue
lung
33
17
16
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
left lung
26
13
13
+ See 37 more…
cell line
A549
21
19
18
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
LHCN-M2
2
1
1
1
1
1
+ See 7 more…
primary cell
fibroblast of lung
6
4
4
2
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 11 more…
in vitro differentiated cells
myotube
1
1
See all biosamples
Download