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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
241
accessible chromatin
207
target gene predictions
180
gene expression
131
chromatin state
120
candidate regulatory elements
93
differential activity
47
variant allelic effects
12
binding sites
10
eQTL
6
Fine-mapped variants
4
caQTL
4
histone modifications
Date released
367
September, 2022
February, 2021
155
September, 2023
140
November, 2021
91
February, 2024
41
May, 2021
38
March, 2023
32
June, 2020
24
August, 2021
20
January, 2021
20
May, 2020
19
January, 2020
16
March, 2020
15
February, 2020
15
November, 2022
12
February, 2023
9
October, 2022
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
March, 2024
5
May, 2022
2
January, 2022
2
May, 2019
1
July, 2020
1
November, 2019
Available data
639
bed bed3+
254
tsv
190
bigWig
125
bed bed9
12
txt
11
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1055
Homo sapiens
Biosample type
698
primary cell
295
tissue
41
cell line
21
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
731
AMP
155
KPMP
140
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
781
hg19
337
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
1055 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
differential activity
variant allelic effects
binding sites
eQTL
Fine-mapped variants
caQTL
histone modifications
primary cell
endothelial cell
15
7
5
2
1
2
hepatocyte
8
3
10
1
1
2
3
pancreatic beta cell
8
2
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
6
3
3
3
1
+ See 136 more…
tissue
muscle of arm
1
16
16
16
1
muscle of leg
2
14
15
13
muscle of back
13
13
13
pigmented layer of retina
20
ovary
1
6
1
4
4
1
+ See 31 more…
cell line
EndoC_BH1
8
1
8
3
1
A673
2
1
1
LHCN-M2
1
1
1
1
SJCRH30
1
1
1
1
colon epithelial cell
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 5 more…
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