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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
124
target gene predictions
accessible chromatin
91
chromatin state
59
gene expression
34
differential activity
22
eQTL
18
variant allelic effects
13
histone modifications
12
binding sites
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
244
September, 2022
123
February, 2021
47
March, 2023
31
May, 2021
20
February, 2024
18
March, 2020
10
January, 2021
10
November, 2021
9
August, 2021
9
May, 2020
8
February, 2020
7
August, 2018
6
August, 2017
5
January, 2022
3
October, 2022
2
January, 2020
2
March, 2024
2
May, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
October, 2019
Available data
350
bed bed3+
90
tsv
84
bed bed9
7
bigBed narrowPeak
7
bigWig
5
bigBed bed9
3
csv
Organism
560
Homo sapiens
Biosample type
392
tissue
122
primary cell
41
cell line
5
in vitro differentiated cells
Organ
737
epithelium
602
kidney
424
brain
372
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
538
AMP
10
ENCODE
10
T1D
2
community
Genome assembly (visualization)
461
hg19
111
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
560 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
muscle of arm
33
16
16
1
muscle of leg
27
14
15
muscle of back
28
13
13
islet of Langerhans
1
3
11
13
1
1
2
2
2
2
body of pancreas
8
5
4
2
1
1
3
+ See 22 more…
primary cell
pancreatic ductal cell
3
3
3
1
2
1
pancreatic delta cell
4
3
3
1
pancreatic acinar cell
3
3
3
1
pancreatic alpha cell
3
3
3
1
pancreatic beta cell
3
3
3
1
+ See 20 more…
cell line
EndoC_BH1
1
8
3
1
LHCN-M2
2
1
1
1
1
A673
2
2
1
Panc1
2
2
1
SJCRH30
2
1
1
+ See 4 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
See all biosamples
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