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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
182
candidate regulatory elements
132
target gene predictions
96
chromatin state
95
accessible chromatin
60
gene expression
34
differential activity
24
eQTL
20
variant allelic effects
13
histone modifications
12
binding sites
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
263
September, 2022
130
February, 2021
47
March, 2023
42
February, 2024
39
May, 2021
33
November, 2021
20
January, 2021
19
March, 2020
11
June, 2020
11
May, 2020
9
August, 2021
9
January, 2020
8
February, 2020
7
August, 2018
7
January, 2022
7
October, 2019
6
August, 2017
3
March, 2024
3
May, 2022
3
October, 2022
2
May, 2019
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
465
bed bed3+
91
tsv
89
bed bed9
75
bigWig
14
bigBed narrowPeak
5
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
685
Homo sapiens
Biosample type
443
tissue
186
primary cell
51
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
630
AMP
33
ENCODE
20
T1D
2
community
Genome assembly (visualization)
583
hg19
168
GRCh38
BIOSAMPLE
TYPE
685 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
1
3
6
11
13
1
1
2
2
2
2
body of pancreas
8
5
4
2
1
1
3
+ See 33 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 23 more…
cell line
EndoC_BH1
1
8
8
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
Panc1
2
2
1
SJCRH30
2
1
1
1
+ See 4 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
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