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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
306
candidate regulatory elements
227
target gene predictions
152
chromatin state
59
accessible chromatin
50
binding sites
36
histone modifications
23
gene expression
10
eQTL
9
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
429
September, 2022
241
February, 2021
68
February, 2024
29
November, 2021
28
June, 2020
20
May, 2021
11
October, 2022
10
March, 2020
9
August, 2021
6
August, 2017
6
February, 2020
5
January, 2020
5
May, 2020
4
January, 2022
4
March, 2024
3
May, 2022
2
May, 2019
1
October, 2019
Available data
697
bed bed3+
146
bed bed9
26
bigWig
26
tsv
3
bigBed bed9
Organism
881
Homo sapiens
Biosample type
368
tissue
250
cell line
218
primary cell
44
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
852
AMP
29
ENCODE
Genome assembly (visualization)
858
hg19
243
GRCh38
BIOSAMPLE
TYPE
881 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 32 more…
cell line
H1-hESC
1
39
1
1
2
1
8
MCF-7
9
6
5
1
3
2
H9
7
8
1
GM23248
2
1
1
1
1
1
LHCN-M2
2
1
1
1
1
1
+ See 40 more…
primary cell
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
4
1
1
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
1
4
2
mammary gland epithelial cell
3
4
3
1
1
1
+ See 26 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 9 more…
stem cell
H1-hESC
1
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