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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
182
gene expression
176
candidate regulatory elements
140
accessible chromatin
111
target gene predictions
108
chromatin state
53
variant allelic effects
47
binding sites
34
histone modifications
28
differential activity
12
Fine-mapped variants
11
eQTL
4
caQTL
Date released
268
September, 2022
246
February, 2021
81
February, 2024
38
May, 2021
36
March, 2023
31
August, 2021
31
June, 2020
29
May, 2020
27
January, 2020
24
March, 2020
22
February, 2020
15
February, 2023
15
November, 2022
7
October, 2019
6
April, 2019
6
August, 2018
6
October, 2022
5
November, 2019
4
January, 2022
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
569
bed bed3+
204
tsv
100
bed bed9
99
bigWig
78
txt
14
bigBed narrowPeak
13
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
906
Homo sapiens
Biosample type
529
primary cell
300
tissue
50
cell line
27
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
906
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
686
hg19
201
GRCh38
BIOSAMPLE
TYPE
906 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
variant allelic effects
binding sites
histone modifications
differential activity
Fine-mapped variants
eQTL
caQTL
primary cell
hepatocyte
13
1
7
2
1
2
1
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 92 more…
tissue
heart
3
37
5
20
21
2
1
1
heart left ventricle
1
11
3
7
8
2
1
1
tibial nerve
2
6
3
3
4
2
3
2
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
+ See 30 more…
cell line
EndoC_BH1
8
8
1
1
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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