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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
304
gene expression
303
accessible chromatin
203
target gene predictions
186
candidate regulatory elements
106
differential activity
105
chromatin state
74
binding sites
59
variant allelic effects
53
histone modifications
24
eQTL
9
Fine-mapped variants
4
caQTL
2
pQTL
Date released
308
February, 2021
280
September, 2022
177
November, 2021
172
September, 2023
94
February, 2024
50
May, 2021
46
June, 2020
45
March, 2023
34
August, 2021
28
May, 2020
25
January, 2020
22
January, 2021
22
November, 2022
21
February, 2020
18
March, 2020
18
October, 2022
13
February, 2023
10
April, 2020
10
August, 2017
7
August, 2018
7
January, 2022
7
October, 2019
5
May, 2022
3
November, 2020
2
March, 2024
2
November, 2019
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
Available data
891
bed bed3+
393
tsv
233
bigWig
95
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1432
Homo sapiens
Biosample type
1100
primary cell
181
tissue
76
in vitro differentiated cells
74
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1047
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
2
community
Genome assembly (visualization)
1009
hg19
367
GRCh38
2
hg18
BIOSAMPLE
TYPE
1432 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
fibroblast
16
4
1
6
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
pericyte cell
10
10
1
1
+ See 194 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
tibial nerve
2
3
3
6
4
2
2
3
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
+ See 27 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
keratinocyte
3
1
+ See 18 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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