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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
186
candidate regulatory elements
123
target gene predictions
112
chromatin state
55
accessible chromatin
53
histone modifications
39
Fine-mapped variants
33
eQTL
23
gene expression
22
binding sites
19
variant allelic effects
Date released
287
September, 2022
159
February, 2021
42
March, 2020
30
January, 2020
29
June, 2020
22
May, 2020
21
February, 2020
21
January, 2022
16
May, 2021
9
August, 2017
7
October, 2022
6
November, 2021
4
February, 2024
4
May, 2019
3
March, 2024
3
September, 2023
2
November, 2019
Available data
460
bed bed3+
103
bed bed9
75
tsv
26
bigWig
7
bigBed bed9
Organism
664
Homo sapiens
Biosample type
508
tissue
111
cell line
41
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
659
AMP
6
ENCODE
Genome assembly (visualization)
615
hg19
206
GRCh38
BIOSAMPLE
TYPE
665 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
binding sites
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
large intestine
27
14
13
1
1
tibial nerve
6
3
4
3
3
2
2
2
sigmoid colon
10
7
5
1
caudate nucleus
5
3
4
2
1
3
2
1
1
+ See 69 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
2
1
1
1
1
SK-N-MC
2
1
1
1
1
2
+ See 17 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
colon epithelial cell
3
3
cardiac fibroblast
3
2
+ See 5 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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