Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
222
candidate regulatory elements
132
target gene predictions
129
chromatin state
56
accessible chromatin
33
gene expression
19
variant allelic effects
15
Fine-mapped variants
14
eQTL
12
histone modifications
11
binding sites
4
caQTL
1
differential activity
Date released
321
September, 2022
141
February, 2021
24
March, 2020
21
November, 2021
20
February, 2024
19
May, 2020
18
February, 2020
18
January, 2020
12
June, 2020
10
May, 2021
9
August, 2021
6
April, 2019
5
January, 2022
4
November, 2019
3
August, 2017
3
February, 2023
3
May, 2019
3
May, 2022
3
October, 2019
3
October, 2022
2
March, 2024
Available data
466
bed bed3+
121
bed bed9
44
tsv
40
bigWig
14
bigBed bed9
Organism
648
Homo sapiens
Biosample type
540
tissue
79
primary cell
26
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
627
AMP
21
ENCODE
Genome assembly (visualization)
612
hg19
196
GRCh38
BIOSAMPLE
TYPE
648 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
variant allelic effects
Fine-mapped variants
eQTL
histone modifications
binding sites
caQTL
differential activity
tissue
heart
37
20
21
5
3
2
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
heart left ventricle
11
7
8
3
1
2
1
1
+ See 32 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
fibroblast of cardiac tissue
3
4
3
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 13 more…
cell line
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
fibroblast of cardiac tissue
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
in vitro differentiated cells
myotube
1
1
cardiac fibroblast
1
See all biosamples
Download