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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
gene expression
214
candidate regulatory elements
113
chromatin state
108
target gene predictions
88
accessible chromatin
66
differential activity
32
variant allelic effects
28
binding sites
14
histone modifications
12
Fine-mapped variants
12
eQTL
3
caQTL
Date released
306
September, 2022
240
February, 2021
155
September, 2023
36
May, 2020
30
January, 2020
29
August, 2021
22
June, 2020
18
February, 2024
18
March, 2020
17
February, 2020
9
November, 2021
6
October, 2022
5
January, 2022
4
February, 2023
4
March, 2023
4
November, 2019
3
April, 2020
3
March, 2024
3
May, 2021
2
May, 2019
2
October, 2019
1
April, 2019
1
August, 2017
Available data
483
bed bed3+
301
tsv
112
bed bed9
89
txt
68
bigWig
11
bigBed bed9
Organism
918
Homo sapiens
Biosample type
453
primary cell
410
tissue
52
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
751
AMP
155
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
609
hg19
201
GRCh38
BIOSAMPLE
TYPE
918 results
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Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
endothelial cell of umbilical vein
6
5
4
2
1
2
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 90 more…
tissue
kidney
7
29
16
14
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 25 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 11 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
renal cell carcinoma
1
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