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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
222
gene expression
164
accessible chromatin
101
candidate regulatory elements
99
target gene predictions
65
differential activity
54
chromatin state
41
binding sites
34
variant allelic effects
25
histone modifications
3
eQTL
2
caQTL
Date released
188
February, 2021
155
September, 2023
150
September, 2022
110
November, 2021
55
February, 2024
25
June, 2020
23
August, 2021
15
November, 2022
14
January, 2020
14
May, 2020
11
February, 2023
9
February, 2020
9
May, 2021
7
April, 2020
6
October, 2022
5
March, 2020
4
March, 2023
3
August, 2017
2
January, 2021
2
March, 2024
2
May, 2022
1
July, 2020
Available data
467
bed bed3+
274
tsv
131
bigWig
78
txt
51
bed bed9
3
csv
2
bigBed bed9
1
bigBed narrowPeak
Organism
810
Homo sapiens
Biosample type
709
primary cell
54
tissue
27
in vitro differentiated cells
20
cell line
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
536
AMP
155
KPMP
110
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
519
hg19
205
GRCh38
organ_slims!
pancreas
BIOSAMPLE
TYPE
810 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 135 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
breast - mammary tissue
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
olfactory neurosphere cell line
1
1
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 4 more…
cell line
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 3 more…
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