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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
50
gene expression
44
candidate regulatory elements
36
target gene predictions
31
binding sites
25
histone modifications
22
eQTL
16
variant allelic effects
14
differential activity
8
chromatin state
2
caQTL
2
pQTL
Date released
September, 2022
113
February, 2021
50
November, 2021
21
June, 2020
18
February, 2024
17
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
March, 2020
10
May, 2020
9
February, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
253
bed bed3+
60
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bed bed9
1
bigBed narrowPeak
Organism
339
Homo sapiens
Biosample type
208
primary cell
72
tissue
37
in vitro differentiated cells
22
cell line
Organ
792
epithelium
424
kidney
331
connective tissue
248
brain
224
pancreas
179
vasculature
162
musculature of body
143
bodily fluid
138
blood
133
embryo
132
blood vessel
132
heart
123
intestine
102
skin of body
100
liver
100
lung
97
limb
82
eye
75
large intestine
71
uterus
57
adipose tissue
49
stomach
48
artery
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
30
adrenal gland
26
small intestine
25
gonad
25
placenta
25
ureter
23
esophagus
16
spinal cord
16
vein
15
lymphatic vessel
15
spleen
15
thymus
14
testis
13
nerve
13
pituitary gland
11
thyroid gland
10
bone marrow
10
bronchus
10
ovary
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
vagina
3
urinary bladder
1
nose
1
pericardium
Project
263
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
264
hg19
77
GRCh38
2
hg18
month_released!
March, 2020
September, 2022
BIOSAMPLE
TYPE
339 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
chromatin state
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
9
osteoblast
5
2
1
1
3
2
foreskin fibroblast
1
5
1
4
2
pancreatic stellate cell
2
2
1
3
+ See 42 more…
tissue
subcutaneous adipose tissue
2
5
2
6
1
1
1
adipose tissue
2
3
1
1
1
4
1
omental fat pad
2
2
3
2
ovary
1
1
4
1
1
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
1
2
4
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
hepatic stellate cell
1
1
+ See 6 more…
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