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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
target gene predictions
131
candidate regulatory elements
101
accessible chromatin
77
chromatin state
76
binding sites
51
gene expression
49
histone modifications
24
eQTL
16
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
201
September, 2022
183
February, 2021
50
November, 2021
46
February, 2024
33
June, 2020
31
October, 2022
21
May, 2021
17
September, 2023
13
August, 2021
10
January, 2020
March, 2020
10
May, 2020
9
August, 2017
9
February, 2020
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
522
bed bed3+
68
bed bed9
61
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
678
Homo sapiens
Biosample type
292
primary cell
226
cell line
111
tissue
49
in vitro differentiated cells
Organ
943
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
602
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
602
hg19
172
GRCh38
2
hg18
month_released!
March, 2020
BIOSAMPLE
TYPE
678 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
1
3
2
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
6
1
1
4
2
+ See 46 more…
cell line
K562
23
7
1
7
2
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
1
2
1
GM19240
2
1
1
1
2
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
adipose tissue
7
7
2
6
1
3
4
1
ovary
5
8
1
4
1
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
omental fat pad
2
5
2
2
2
2
subcutaneous abdominal adipose tissue
5
1
+ See 9 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
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