Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
accessible chromatin
92
candidate regulatory elements
83
target gene predictions
54
chromatin state
53
gene expression
33
binding sites
26
histone modifications
22
eQTL
16
differential activity
16
variant allelic effects
2
caQTL
2
pQTL
Date released
138
September, 2022
118
February, 2021
53
November, 2021
22
June, 2020
22
September, 2023
18
February, 2024
17
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
March, 2020
10
May, 2020
9
February, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
4
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
355
bed bed3+
65
tsv
58
bigWig
47
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
492
Homo sapiens
Biosample type
300
primary cell
108
tissue
51
in vitro differentiated cells
33
cell line
Organ
943
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
407
AMP
53
ENCODE
20
KPMP
4
ITG
4
LungMap
2
T1D
2
community
Genome assembly (visualization)
412
hg19
126
GRCh38
2
hg18
month_released!
March, 2020
BIOSAMPLE
TYPE
492 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 48 more…
tissue
adipose tissue
2
7
7
6
3
1
4
1
ovary
1
8
5
4
1
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
omental fat pad
2
5
2
2
2
2
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 8 more…
See all biosamples
Download