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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
90
accessible chromatin
51
gene expression
45
candidate regulatory elements
41
target gene predictions
31
binding sites
25
histone modifications
22
eQTL
16
variant allelic effects
14
differential activity
8
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
September, 2022
114
February, 2021
50
November, 2021
22
June, 2020
18
February, 2024
17
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
11
March, 2020
10
January, 2020
10
May, 2020
9
February, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
260
bed bed3+
67
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bed bed9
1
bigBed narrowPeak
Organism
353
Homo sapiens
Biosample type
208
primary cell
84
tissue
38
in vitro differentiated cells
22
cell line
1
stem cell
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
277
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
277
hg19
83
GRCh38
2
hg18
month_released!
September, 2022
BIOSAMPLE
TYPE
353 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
9
osteoblast
5
2
1
1
3
2
foreskin fibroblast
1
5
1
4
2
pancreatic stellate cell
2
2
1
3
+ See 42 more…
tissue
subcutaneous adipose tissue
2
5
2
6
1
1
1
3
adipose tissue
2
3
1
2
1
4
1
omental fat pad
2
2
3
2
3
ovary
1
1
4
2
1
subcutaneous abdominal adipose tissue
5
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
1
2
4
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
hepatic stellate cell
1
1
+ See 6 more…
stem cell
mesenchymal stem cell
1
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