Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
64
candidate regulatory elements
47
target gene predictions
33
chromatin state
16
accessible chromatin
12
binding sites
5
histone modifications
2
eQTL
2
gene expression
2
variant allelic effects
Date released
96
September, 2022
46
February, 2021
18
November, 2021
6
June, 2020
5
May, 2021
3
October, 2022
2
February, 2024
2
January, 2022
2
March, 2020
2
March, 2024
1
August, 2017
Available data
147
bed bed3+
32
bed bed9
10
bigWig
2
tsv
Organism
183
Homo sapiens
Biosample type
85
tissue
59
primary cell
36
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
165
AMP
18
ENCODE
Genome assembly (visualization)
179
hg19
52
GRCh38
BIOSAMPLE
TYPE
183 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
adrenal gland
28
17
14
1
1
1
ovary
8
6
4
1
1
1
mammary gland
1
1
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
fibroblast of mammary gland
2
1
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 5 more…
cell line
MCF-7
9
6
5
1
3
2
T47D
3
2
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
See all biosamples
Download