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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
44
September, 2022
33
May, 2021
27
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
8
August, 2021
8
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
154
bed bed3+
76
tsv
57
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
272
Homo sapiens
Biosample type
125
primary cell
111
tissue
33
cell line
3
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
232
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
181
hg19
61
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
272 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
2
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
6
11
1
3
13
1
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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