Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
137
candidate regulatory elements
117
target gene predictions
accessible chromatin
76
chromatin state
51
gene expression
33
differential activity
18
eQTL
14
histone modifications
14
variant allelic effects
11
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
204
September, 2022
102
February, 2021
47
March, 2023
31
May, 2021
16
February, 2024
15
November, 2021
11
March, 2020
10
January, 2021
8
August, 2021
7
August, 2017
7
August, 2018
7
January, 2022
4
May, 2020
3
March, 2024
2
February, 2020
2
January, 2020
1
April, 2019
1
February, 2023
1
January, 2018
1
October, 2022
Available data
303
bed bed3+
79
tsv
68
bed bed9
7
bigBed narrowPeak
7
bigWig
3
csv
2
bigBed bed9
Organism
480
Homo sapiens
Biosample type
320
tissue
101
primary cell
56
cell line
3
in vitro differentiated cells
Organ
737
epithelium
602
kidney
424
brain
370
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
453
AMP
15
ENCODE
10
T1D
2
community
Genome assembly (visualization)
383
hg19
96
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
480 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
differential activity
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
15
1
large intestine
27
14
13
1
islet of Langerhans
1
3
11
13
1
1
2
2
2
2
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
5
+ See 18 more…
primary cell
pancreatic ductal cell
3
3
3
2
1
1
pancreatic delta cell
4
3
3
1
pancreatic acinar cell
3
3
3
1
pancreatic alpha cell
3
3
3
1
pancreatic beta cell
3
3
3
1
+ See 18 more…
cell line
EndoC_BH1
1
8
3
1
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
Panc1
2
2
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download