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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
33
May, 2021
31
September, 2022
27
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
8
August, 2021
8
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
2
February, 2020
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
150
bed bed3+
76
tsv
57
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
255
Homo sapiens
Biosample type
125
primary cell
97
tissue
30
cell line
3
in vitro differentiated cells
Organ
853
epithelium
568
kidney
379
connective tissue
378
brain
294
musculature of body
255
pancreas
231
lung
224
intestine
212
vasculature
199
heart
192
limb
174
embryo
160
blood vessel
151
skin of body
145
bodily fluid
137
blood
132
large intestine
126
liver
110
extraembryonic component
95
stomach
94
eye
77
adipose tissue
75
uterus
66
bone element
64
small intestine
61
artery
60
mammary gland
59
adrenal gland
57
prostate gland
54
placenta
51
ureter
47
penis
42
lymph node
39
gonad
38
esophagus
37
thymus
33
spinal cord
27
spleen
21
nerve
19
lymphoid tissue
19
ovary
19
testis
19
thyroid gland
17
lymphatic vessel
15
mouth
15
skeleton
15
vein
13
pituitary gland
12
bronchus
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
215
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
164
hg19
48
GRCh38
annotation_type!
chromatin state
binding sites
BIOSAMPLE
TYPE
255 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
2
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
6
11
1
13
1
1
2
2
2
body of pancreas
2
5
8
1
1
3
pancreas
5
5
5
1
1
1
endocrine pancreas
4
7
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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