Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
118
candidate regulatory elements
93
target gene predictions
85
accessible chromatin
chromatin state
53
gene expression
33
differential activity
20
eQTL
19
variant allelic effects
14
Fine-mapped variants
8
histone modifications
7
binding sites
2
sQTL
2
variant to gene
Date released
123
September, 2022
89
February, 2021
47
March, 2023
36
May, 2021
25
February, 2024
20
January, 2021
18
March, 2020
18
November, 2021
14
May, 2020
11
January, 2020
10
June, 2020
8
August, 2021
8
February, 2020
7
August, 2018
6
January, 2022
6
October, 2019
4
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
330
bed bed3+
93
tsv
71
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
454
Homo sapiens
Biosample type
287
tissue
127
primary cell
37
cell line
3
in vitro differentiated cells
Organ
896
epithelium
575
kidney
410
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
414
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
356
hg19
76
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
454 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
binding sites
sQTL
variant to gene
tissue
muscle of arm
33
16
1
1
muscle of leg
27
14
2
islet of Langerhans
1
6
11
13
1
2
1
2
2
2
tibial nerve
6
3
3
2
2
2
3
body of pancreas
8
5
2
1
1
3
+ See 29 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 13 more…
cell line
EndoC_BH1
1
8
8
3
1
GM23248
2
1
1
1
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download