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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
72
accessible chromatin
61
gene expression
57
target gene predictions
43
candidate regulatory elements
differential activity
28
eQTL
27
chromatin state
14
variant allelic effects
11
Fine-mapped variants
7
binding sites
7
histone modifications
2
sQTL
2
variant to gene
Date released
68
September, 2022
54
February, 2021
36
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
17
March, 2020
15
March, 2023
14
August, 2021
9
May, 2020
8
January, 2020
7
August, 2018
7
February, 2020
7
January, 2022
6
October, 2019
5
August, 2017
5
June, 2020
2
January, 2018
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
1
November, 2022
Available data
208
bed bed3+
65
tsv
62
bigWig
21
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
Organism
331
Homo sapiens
Biosample type
196
tissue
97
primary cell
34
cell line
4
in vitro differentiated cells
Organ
857
epithelium
596
kidney
466
brain
444
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
293
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
255
hg19
84
GRCh38
2
hg18
annotation_type!
differential activity
BIOSAMPLE
TYPE
331 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
eQTL
chromatin state
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
13
3
1
2
2
1
2
2
adipose tissue
2
3
8
7
4
6
1
1
body of pancreas
2
5
8
1
4
1
3
pancreas
5
5
5
1
3
1
1
1
subcutaneous adipose tissue
2
5
2
6
1
1
3
+ See 14 more…
primary cell
pancreatic ductal cell
6
3
3
1
1
2
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
3
4
1
+ See 12 more…
cell line
EndoC_BH1
8
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
white adipose cell
1
See all biosamples
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