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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
candidate regulatory elements
120
target gene predictions
107
accessible chromatin
89
chromatin state
67
gene expression
histone modifications
44
eQTL
41
Fine-mapped variants
33
differential activity
28
variant allelic effects
21
binding sites
2
sQTL
2
variant to gene
Date released
224
September, 2022
87
February, 2021
47
March, 2020
47
March, 2023
44
May, 2021
33
January, 2020
26
February, 2024
25
June, 2020
25
May, 2020
22
January, 2022
20
February, 2020
20
January, 2021
18
November, 2021
9
August, 2017
8
August, 2021
7
August, 2018
6
October, 2019
6
October, 2022
4
May, 2019
3
November, 2019
3
September, 2023
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
414
bed bed3+
143
tsv
79
bed bed9
78
bigWig
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
688
Homo sapiens
Biosample type
418
tissue
158
primary cell
105
cell line
7
in vitro differentiated cells
1
stem cell
Organ
921
epithelium
646
kidney
433
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
649
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
555
hg19
213
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
689 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
29
16
2
18
1
2
1
1
islet of Langerhans
1
6
3
11
13
2
1
2
2
2
body of pancreas
8
5
4
2
1
3
1
caudate nucleus
5
3
2
4
1
2
3
1
pancreas
5
5
5
3
1
1
1
+ See 40 more…
primary cell
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic ductal cell
3
6
3
3
1
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 21 more…
cell line
EndoC_BH1
1
8
8
3
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-DZ
4
2
1
2
SK-N-MC
2
1
1
1
2
+ See 14 more…
in vitro differentiated cells
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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