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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
49
gene expression
46
accessible chromatin
33
candidate regulatory elements
31
differential activity
31
target gene predictions
21
chromatin state
17
eQTL
11
variant allelic effects
8
binding sites
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
56
September, 2022
45
March, 2023
33
May, 2021
32
February, 2021
25
February, 2024
9
March, 2020
8
August, 2021
7
August, 2018
6
January, 2022
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
133
bed bed3+
77
tsv
36
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
256
Homo sapiens
Biosample type
129
tissue
86
primary cell
38
cell line
3
in vitro differentiated cells
Organ
610
epithelium
503
kidney
418
brain
359
connective tissue
357
musculature of body
295
lung
262
intestine
242
limb
239
heart
231
pancreas
214
vasculature
202
embryo
193
bodily fluid
183
blood
181
skin of body
173
blood vessel
163
large intestine
138
extraembryonic component
137
liver
109
stomach
101
eye
88
adipose tissue
80
bone element
80
small intestine
79
uterus
76
mammary gland
71
prostate gland
68
placenta
65
artery
64
ureter
63
adrenal gland
59
penis
58
lymph node
47
gonad
47
thymus
43
spinal cord
41
esophagus
34
spleen
25
nerve
25
testis
23
lymphoid tissue
22
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
12
bronchus
12
pituitary gland
11
lymphatic vessel
10
tongue
10
urinary bladder
10
vagina
8
bone marrow
4
nose
3
trachea
1
pericardium
Project
256
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
164
hg19
49
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
256 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
target gene predictions
chromatin state
eQTL
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
11
6
1
3
13
1
2
2
2
2
body of pancreas
2
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
testis
1
1
7
3
3
1
1
endocrine pancreas
7
4
4
+ See 7 more…
primary cell
pancreatic beta cell
3
4
3
1
1
pancreatic ductal cell
3
3
3
1
1
1
pancreatic alpha cell
3
3
3
1
1
pancreatic acinar cell
3
2
3
1
1
pancreatic delta cell
3
2
3
1
1
+ See 12 more…
cell line
EndoC_BH1
8
8
1
1
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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