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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
30
September, 2022
28
February, 2021
26
May, 2021
19
February, 2024
11
November, 2021
10
January, 2021
8
August, 2021
7
August, 2018
6
March, 2020
6
October, 2019
4
January, 2022
4
June, 2020
3
August, 2017
3
January, 2020
2
February, 2020
2
May, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
104
bed bed3+
76
tsv
50
bigWig
13
bed bed9
7
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
222
Homo sapiens
Biosample type
96
tissue
95
primary cell
28
cell line
3
in vitro differentiated cells
Organ
786
epithelium
561
kidney
373
brain
364
connective tissue
288
musculature of body
232
lung
222
pancreas
220
vasculature
213
intestine
196
heart
187
limb
170
blood vessel
161
bodily fluid
159
skin of body
152
blood
131
embryo
131
liver
130
large intestine
110
extraembryonic component
98
eye
87
stomach
73
adipose tissue
73
bone element
67
mammary gland
63
artery
62
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
51
adrenal gland
48
ureter
39
gonad
35
thymus
34
spinal cord
33
esophagus
26
spleen
25
uterus
22
testis
20
nerve
18
lymphatic vessel
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
15
mouth
15
skeleton
12
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
199
AMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
131
hg19
54
GRCh38
annotation_type!
target gene predictions
variant allelic effects
BIOSAMPLE
TYPE
222 results
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Clear Filters
accessible chromatin
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
11
3
13
1
2
2
2
2
body of pancreas
2
8
4
1
3
pancreas
5
5
3
1
1
1
endocrine pancreas
7
4
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
6
3
3
2
1
pancreatic beta cell
8
3
3
pancreatic alpha cell
7
3
3
pancreatic acinar cell
6
3
3
pancreatic delta cell
5
3
3
+ See 10 more…
cell line
EndoC_BH1
8
8
3
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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