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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
72
gene expression
target gene predictions
47
candidate regulatory elements
37
differential activity
34
chromatin state
23
eQTL
20
histone modifications
18
binding sites
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
62
September, 2022
55
February, 2021
54
February, 2024
51
March, 2023
26
May, 2021
18
August, 2021
15
November, 2021
13
March, 2020
10
January, 2021
9
June, 2020
9
May, 2020
7
August, 2018
6
August, 2017
6
January, 2020
6
October, 2019
5
January, 2022
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
195
bed bed3+
104
tsv
77
bigWig
27
bed bed9
11
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
368
Homo sapiens
Biosample type
161
primary cell
146
tissue
52
cell line
9
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
341
AMP
15
ENCODE
10
T1D
2
community
Genome assembly (visualization)
245
hg19
113
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
368 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
13
1
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
pancreatic ductal cell
6
3
3
2
1
1
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
+ See 15 more…
tissue
islet of Langerhans
6
11
3
13
1
2
1
2
2
2
liver
4
1
13
1
9
7
2
1
1
body of pancreas
2
8
4
1
1
3
pancreas
5
5
3
1
1
1
1
endocrine pancreas
7
4
+ See 8 more…
cell line
EndoC_BH1
8
8
3
1
HepG2
2
2
2
5
3
HuH-7
1
1
1
1
1
Panc1
2
1
8988T
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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