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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
target gene predictions
92
accessible chromatin
91
chromatin state
59
gene expression
34
differential activity
22
eQTL
variant allelic effects
13
histone modifications
12
binding sites
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
166
September, 2022
120
February, 2021
47
March, 2023
32
February, 2024
26
May, 2021
19
November, 2021
12
March, 2020
10
January, 2021
10
June, 2020
9
August, 2021
8
February, 2020
8
January, 2020
7
August, 2018
7
October, 2019
6
August, 2017
5
January, 2022
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
2
May, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
298
bed bed3+
90
tsv
84
bed bed9
66
bigWig
7
bigBed narrowPeak
5
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
510
Homo sapiens
Biosample type
328
tissue
137
primary cell
41
cell line
4
in vitro differentiated cells
Organ
786
epithelium
561
kidney
373
brain
366
connective tissue
288
musculature of body
232
lung
222
pancreas
220
vasculature
213
intestine
196
heart
187
limb
170
blood vessel
161
bodily fluid
159
skin of body
152
blood
131
embryo
131
liver
130
large intestine
110
extraembryonic component
98
eye
87
stomach
73
adipose tissue
73
bone element
67
mammary gland
63
artery
62
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
51
adrenal gland
48
ureter
39
gonad
35
thymus
34
spinal cord
33
esophagus
26
spleen
25
uterus
22
testis
20
nerve
18
lymphatic vessel
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
15
mouth
15
skeleton
12
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
479
AMP
19
ENCODE
10
T1D
2
community
Genome assembly (visualization)
411
hg19
147
GRCh38
annotation_type!
target gene predictions
variant allelic effects
BIOSAMPLE
TYPE
510 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
binding sites
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
muscle of arm
33
1
16
muscle of leg
27
2
15
islet of Langerhans
6
3
11
13
1
2
2
2
2
muscle of back
28
13
body of pancreas
8
4
2
1
3
+ See 28 more…
primary cell
pancreatic ductal cell
6
3
3
2
1
pancreatic beta cell
8
3
3
pancreatic alpha cell
7
3
3
pancreatic acinar cell
6
3
3
pancreatic delta cell
5
3
3
+ See 19 more…
cell line
EndoC_BH1
8
8
3
LHCN-M2
2
1
1
1
1
SJCRH30
2
1
1
A673
2
1
Panc1
2
1
+ See 4 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
See all biosamples
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