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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
accessible chromatin
target gene predictions
124
candidate regulatory elements
70
chromatin state
46
binding sites
42
variant allelic effects
31
histone modifications
13
eQTL
3
Fine-mapped variants
1
caQTL
1
gene expression
1
sQTL
Date released
129
September, 2022
126
February, 2021
79
November, 2021
65
February, 2024
27
June, 2020
19
August, 2021
17
May, 2020
16
January, 2020
15
November, 2022
11
January, 2021
10
February, 2023
8
May, 2021
7
April, 2020
6
August, 2017
6
October, 2019
6
October, 2022
4
March, 2020
2
February, 2020
2
May, 2022
2
November, 2019
1
April, 2019
1
June, 2021
Available data
480
bed bed3+
176
bigWig
63
bed bed9
12
bigBed narrowPeak
4
bigBed bed9
4
tsv
3
bam
3
bed gappedPeak
3
xls
Organism
559
Homo sapiens
Biosample type
382
primary cell
123
tissue
37
cell line
17
in vitro differentiated cells
Organ
478
epithelium
347
brain
312
kidney
309
connective tissue
287
musculature of body
231
lung
210
intestine
188
limb
180
heart
173
vasculature
160
bodily fluid
155
skin of body
151
blood
142
pancreas
134
blood vessel
126
large intestine
121
embryo
109
extraembryonic component
103
liver
98
eye
86
stomach
69
bone element
68
mammary gland
61
prostate gland
60
small intestine
56
adipose tissue
55
placenta
53
lymph node
53
penis
52
artery
51
ureter
50
adrenal gland
35
thymus
34
gonad
32
spinal cord
30
esophagus
24
spleen
22
uterus
19
nerve
19
testis
17
lymphoid tissue
17
vein
15
skeleton
15
thyroid gland
14
ovary
13
bronchus
13
lymphatic vessel
13
mouth
10
bone marrow
8
breast
7
tongue
6
urinary bladder
6
vagina
5
trachea
3
nose
1
pituitary gland
Project
462
AMP
79
ENCODE
11
T1D
7
LungMap
Genome assembly (visualization)
559
hg19
216
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
559 results
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Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
gene expression
sQTL
primary cell
endothelial cell
15
2
2
1
1
1
1
hepatocyte
8
1
1
1
2
4
endothelial cell of umbilical vein
2
6
5
2
foreskin keratinocyte
11
4
endothelial cell of hepatic sinusoid
6
6
+ See 95 more…
tissue
islet of Langerhans
6
3
2
1
1
9
1
pigmented layer of retina
20
body of pancreas
8
4
1
1
3
pancreas
5
5
3
1
1
1
endocrine pancreas
7
4
+ See 18 more…
cell line
EndoC_BH1
8
1
keratinocyte
3
1
Panc1
2
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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