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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
accessible chromatin
56
gene expression
target gene predictions
35
differential activity
34
candidate regulatory elements
25
chromatin state
20
eQTL
15
variant allelic effects
11
Fine-mapped variants
11
binding sites
11
histone modifications
2
caQTL
2
sQTL
2
variant to gene
Date released
47
March, 2023
45
September, 2022
44
February, 2021
26
May, 2021
25
February, 2024
12
March, 2020
11
May, 2020
11
November, 2021
10
January, 2021
8
August, 2021
7
August, 2018
7
January, 2020
7
January, 2022
7
June, 2020
6
February, 2020
6
October, 2019
5
September, 2023
4
February, 2023
4
November, 2019
3
August, 2017
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
1
October, 2022
Available data
153
bed bed3+
92
tsv
63
bigWig
21
bed bed9
11
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
300
Homo sapiens
Biosample type
136
tissue
128
primary cell
33
cell line
3
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
272
AMP
11
ENCODE
10
T1D
5
KPMP
2
community
Genome assembly (visualization)
194
hg19
82
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
300 results
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Clear Filters
accessible chromatin
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
caQTL
sQTL
variant to gene
tissue
islet of Langerhans
6
11
3
13
1
2
2
1
2
2
body of pancreas
2
8
4
1
1
3
coronary artery
3
1
3
3
2
2
3
1
pancreas
5
5
3
1
1
1
1
tibial artery
3
1
3
3
2
2
3
+ See 10 more…
primary cell
pancreatic ductal cell
6
3
3
1
1
2
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
3
3
1
+ See 16 more…
cell line
EndoC_BH1
8
8
3
1
smooth muscle cell of the coronary artery
1
1
1
1
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
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