Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
17
September, 2022
15
February, 2024
11
November, 2021
10
January, 2021
8
May, 2021
6
October, 2019
4
June, 2020
3
August, 2017
2
January, 2020
2
May, 2020
2
November, 2019
1
April, 2019
1
June, 2021
Available data
67
bed bed3+
50
bigWig
13
bed bed9
7
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
82
Homo sapiens
Biosample type
37
primary cell
34
tissue
11
cell line
Organ
265
epithelium
136
connective tissue
127
kidney
114
brain
101
musculature of body
86
lung
82
pancreas
80
intestine
77
heart
70
limb
69
vasculature
68
eye
54
blood vessel
48
skin of body
46
large intestine
42
extraembryonic component
41
liver
40
embryo
39
bodily fluid
37
blood
32
stomach
30
bone element
23
small intestine
22
mammary gland
21
adrenal gland
20
placenta
19
artery
18
prostate gland
17
adipose tissue
17
ureter
16
lymph node
13
gonad
13
penis
13
thymus
11
esophagus
11
skeleton
10
spinal cord
8
spleen
7
lymphoid tissue
7
nerve
7
uterus
7
vein
6
lymphatic vessel
6
ovary
6
testis
6
thyroid gland
5
bronchus
5
mouth
4
bone marrow
3
breast
3
tongue
3
urinary bladder
2
nose
2
vagina
1
trachea
Project
61
AMP
11
ENCODE
10
T1D
Genome assembly (visualization)
82
hg19
46
GRCh38
BIOSAMPLE
TYPE
82 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
chromatin state
primary cell
pancreatic beta cell
8
pancreatic alpha cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic delta cell
5
+ See 3 more…
tissue
islet of Langerhans
6
3
pancreas
5
3
body of pancreas
4
endocrine pancreas
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8988T
1
HPDE6-E6E7
1
Panc1
1
See all biosamples
Download