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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
gene expression
44
accessible chromatin
31
differential activity
27
target gene predictions
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
44
September, 2022
43
March, 2023
33
May, 2021
31
February, 2021
25
February, 2024
8
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
121
bed bed3+
73
tsv
36
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
232
Homo sapiens
Biosample type
109
tissue
88
primary cell
32
cell line
3
in vitro differentiated cells
Organ
638
epithelium
509
kidney
430
brain
378
connective tissue
358
musculature of body
299
lung
270
intestine
236
heart
235
limb
232
pancreas
218
bodily fluid
213
embryo
213
vasculature
207
blood
194
skin of body
170
blood vessel
168
large intestine
148
liver
143
extraembryonic component
110
stomach
105
eye
86
bone element
83
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
64
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
41
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
vein
22
nerve
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
232
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
145
hg19
40
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
232 results
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Clear Filters
gene expression
accessible chromatin
differential activity
target gene predictions
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
11
6
1
3
13
1
1
2
2
2
pancreas
5
5
5
3
1
1
1
1
body of pancreas
2
5
8
4
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
3
3
3
1
1
2
1
pancreatic beta cell
3
4
3
1
1
pancreatic alpha cell
3
3
3
1
1
pancreatic acinar cell
3
2
3
1
1
pancreatic delta cell
3
2
3
1
1
+ See 11 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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