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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
45
accessible chromatin
35
gene expression
33
differential activity
29
target gene predictions
8
variant allelic effects
4
candidate regulatory elements
4
histone modifications
chromatin state
2
binding sites
Date released
41
March, 2023
28
May, 2021
20
January, 2021
18
November, 2021
15
February, 2024
10
February, 2021
10
September, 2022
7
August, 2018
5
October, 2019
1
February, 2023
1
June, 2020
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
Available data
90
bed bed3+
59
tsv
41
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
160
Homo sapiens
Biosample type
126
primary cell
tissue
31
cell line
3
in vitro differentiated cells
Organ
839
epithelium
335
kidney
325
connective tissue
187
bodily fluid
179
blood
165
vasculature
160
pancreas
159
embryo
147
skin of body
108
blood vessel
102
brain
102
lung
91
liver
70
mammary gland
67
uterus
63
musculature of body
55
bone element
54
lymph node
53
intestine
52
penis
52
prostate gland
38
extraembryonic component
38
heart
36
large intestine
35
eye
31
artery
19
lymphatic vessel
17
vein
14
bronchus
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
gonad
10
pituitary gland
9
esophagus
7
limb
7
testis
6
mouth
6
spinal cord
5
adipose tissue
5
lymphoid tissue
5
trachea
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
120
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
92
hg19
24
GRCh38
biosample_type!
tissue
annotation_type!
chromatin state
BIOSAMPLE
TYPE
160 results
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Clear Filters
accessible chromatin
gene expression
differential activity
target gene predictions
variant allelic effects
candidate regulatory elements
histone modifications
binding sites
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
+ See 12 more…
cell line
EndoC_BH1
8
8
3
1
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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