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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
target gene predictions
81
candidate regulatory elements
77
accessible chromatin
58
gene expression
33
differential activity
18
binding sites
17
histone modifications
15
eQTL
11
variant allelic effects
5
Fine-mapped variants
5
chromatin state
2
sQTL
2
variant to gene
Date released
85
September, 2022
84
February, 2021
76
February, 2024
47
March, 2023
40
May, 2021
20
January, 2021
20
November, 2021
16
August, 2021
14
June, 2020
10
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
337
bed bed3+
86
tsv
59
bigWig
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
452
Homo sapiens
Biosample type
148
cell line
144
primary cell
132
tissue
27
in vitro differentiated cells
1
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
410
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
351
hg19
101
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
452 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
chromatin state
sQTL
variant to gene
cell line
H1-hESC
39
1
1
8
2
1
EndoC_BH1
1
8
8
3
1
H9
8
7
HUES8
4
1
1
CyT49
4
1
+ See 20 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 16 more…
tissue
islet of Langerhans
1
6
11
2
1
13
1
2
3
2
2
body of pancreas
5
8
2
1
1
3
pancreas
5
5
5
1
1
1
1
1
chorionic villus
4
8
endocrine pancreas
4
7
+ See 12 more…
in vitro differentiated cells
endodermal cell
2
4
mesodermal cell
1
4
1
trophoblast cell
2
2
ectodermal cell
1
2
pancreatic ductal cell
3
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
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