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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
80
target gene predictions
74
accessible chromatin
48
gene expression
33
differential activity
16
eQTL
11
histone modifications
11
variant allelic effects
8
binding sites
5
Fine-mapped variants
4
chromatin state
2
sQTL
2
variant to gene
Date released
97
September, 2022
64
February, 2021
47
March, 2023
36
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
10
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
271
bed bed3+
76
tsv
60
bigWig
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
377
Homo sapiens
Biosample type
179
tissue
158
primary cell
33
cell line
7
in vitro differentiated cells
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
334
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
285
hg19
52
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
377 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
differential activity
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
chromatin state
sQTL
variant to gene
tissue
placenta
26
15
1
1
2
1
islet of Langerhans
1
6
11
13
1
1
2
2
3
2
2
body of pancreas
8
5
2
1
1
3
pancreas
5
5
5
1
1
1
1
1
chorionic villus
8
4
+ See 12 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 22 more…
cell line
EndoC_BH1
1
8
8
3
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
HTR-8/Svneo
1
1
+ See 2 more…
in vitro differentiated cells
trophoblast cell
2
2
pancreatic ductal cell
3
See all biosamples
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