Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
accessible chromatin
24
candidate regulatory elements
24
gene expression
20
target gene predictions
16
chromatin state
15
eQTL
5
Fine-mapped variants
4
binding sites
4
variant allelic effects
3
differential activity
3
histone modifications
2
sQTL
2
variant to gene
Date released
40
September, 2022
24
February, 2021
21
May, 2021
13
February, 2024
9
March, 2020
8
August, 2021
8
March, 2023
6
May, 2020
4
January, 2020
4
January, 2022
3
August, 2017
3
June, 2020
2
February, 2020
2
November, 2019
April, 2019
1
February, 2023
1
January, 2018
1
October, 2019
Available data
88
bed bed3+
29
tsv
17
bigWig
13
bed bed9
3
csv
2
bigBed bed9
Organism
150
Homo sapiens
Biosample type
primary cell
113
tissue
34
cell line
3
in vitro differentiated cells
Organ
431
brain
342
kidney
325
musculature of body
277
lung
266
intestine
243
limb
218
heart
209
bodily fluid
198
blood
193
embryo
177
connective tissue
168
large intestine
150
pancreas
130
epithelium
108
stomach
106
extraembryonic component
104
skin of body
97
vasculature
93
liver
90
blood vessel
88
adipose tissue
86
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
41
mammary gland
39
spinal cord
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
penis
21
ovary
20
thyroid gland
18
skeleton
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
4
lymphatic vessel
4
nose
3
vein
Project
148
AMP
2
community
Genome assembly (visualization)
113
hg19
38
GRCh38
month_released!
April, 2019
biosample_type!
primary cell
BIOSAMPLE
TYPE
150 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
eQTL
Fine-mapped variants
binding sites
variant allelic effects
differential activity
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
2
13
2
2
1
1
2
2
body of pancreas
8
2
5
4
1
3
1
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download