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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
80
target gene predictions
74
accessible chromatin
48
gene expression
47
chromatin state
33
differential activity
16
eQTL
11
histone modifications
11
variant allelic effects
8
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
143
September, 2022
64
February, 2021
47
March, 2023
36
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
10
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
268
bed bed3+
76
tsv
60
bigWig
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
420
Homo sapiens
Biosample type
209
tissue
166
primary cell
37
cell line
8
in vitro differentiated cells
Organ
946
epithelium
652
kidney
460
brain
451
connective tissue
372
musculature of body
310
lung
285
intestine
274
pancreas
265
vasculature
255
heart
244
limb
216
bodily fluid
214
embryo
205
blood
203
blood vessel
203
skin of body
171
large intestine
153
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
adipose tissue
86
mammary gland
83
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
377
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
328
hg19
98
GRCh38
month_released!
August, 2017
BIOSAMPLE
TYPE
420 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
26
15
1
14
1
2
1
islet of Langerhans
1
6
11
1
13
1
1
2
2
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
2
1
1
1
1
chorionic villus
8
4
4
+ See 12 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
7
5
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 22 more…
cell line
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
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