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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
57
target gene predictions
55
candidate regulatory elements
48
gene expression
33
differential activity
30
chromatin state
14
variant allelic effects
8
eQTL
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
variant to gene
1
sQTL
Date released
83
September, 2022
49
February, 2021
47
March, 2023
33
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
9
May, 2020
August, 2021
7
August, 2018
7
January, 2020
6
October, 2019
5
June, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
209
bed bed3+
76
tsv
60
bigWig
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
333
Homo sapiens
Biosample type
170
tissue
126
primary cell
34
cell line
3
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
447
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
293
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
242
hg19
77
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
333 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
variant allelic effects
eQTL
histone modifications
Fine-mapped variants
binding sites
variant to gene
sQTL
tissue
renal pelvis
2
9
19
9
1
islet of Langerhans
6
1
11
3
1
6
1
2
2
2
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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