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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
86
target gene predictions
75
accessible chromatin
53
chromatin state
46
candidate regulatory elements
44
gene expression
33
differential activity
10
variant allelic effects
9
eQTL
5
Fine-mapped variants
2
binding sites
2
variant to gene
1
sQTL
Date released
142
September, 2022
February, 2021
47
March, 2023
38
May, 2021
28
February, 2024
24
November, 2021
20
January, 2021
11
June, 2020
10
March, 2020
August, 2021
7
August, 2018
6
August, 2017
6
January, 2022
6
May, 2020
6
October, 2019
4
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
225
bed bed3+
72
tsv
57
bigWig
46
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
366
Homo sapiens
Biosample type
186
tissue
125
primary cell
52
cell line
3
in vitro differentiated cells
Organ
730
epithelium
436
kidney
356
brain
340
connective tissue
282
musculature of body
241
lung
238
pancreas
218
intestine
216
vasculature
199
heart
186
limb
167
blood vessel
154
embryo
141
bodily fluid
136
skin of body
135
blood
128
large intestine
120
liver
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
small intestine
60
adipose tissue
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
320
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
277
hg19
104
GRCh38
month_released!
February, 2021
August, 2021
BIOSAMPLE
TYPE
366 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
differential activity
variant allelic effects
eQTL
Fine-mapped variants
binding sites
variant to gene
sQTL
tissue
large intestine
14
1
13
13
islet of Langerhans
1
6
3
5
1
5
2
1
2
1
body of pancreas
5
4
4
2
1
1
3
sigmoid colon
7
1
5
5
pancreas
5
5
3
2
1
1
+ See 16 more…
primary cell
pancreatic beta cell
2
8
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
pancreatic ductal cell
3
6
3
3
1
pancreatic alpha cell
2
7
3
3
+ See 13 more…
cell line
EndoC_BH1
1
8
8
3
1
HCT116
3
1
1
HT-29
2
1
1
1
Panc1
2
1
1
SW480
1
1
1
1
+ See 5 more…
in vitro differentiated cells
pancreatic ductal cell
3
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