Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
45
accessible chromatin
35
gene expression
33
differential activity
27
target gene predictions
7
variant allelic effects
3
candidate regulatory elements
3
chromatin state
Date released
41
March, 2023
28
May, 2021
20
January, 2021
18
November, 2021
15
February, 2024
13
September, 2022
February, 2021
7
August, 2018
5
October, 2019
1
February, 2023
1
June, 2020
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
Available data
80
bed bed3+
59
tsv
38
bigWig
11
bigBed narrowPeak
3
bam
3
bed bed9
3
bed gappedPeak
3
csv
3
xls
Organism
153
Homo sapiens
Biosample type
119
primary cell
tissue
31
cell line
3
in vitro differentiated cells
Organ
704
epithelium
282
connective tissue
248
kidney
153
pancreas
143
vasculature
140
bodily fluid
138
embryo
134
blood
122
skin of body
107
lung
94
blood vessel
92
brain
82
liver
65
uterus
59
mammary gland
54
musculature of body
44
bone element
43
intestine
40
prostate gland
39
extraembryonic component
36
penis
35
lymph node
30
eye
28
heart
27
large intestine
21
artery
16
lymphatic vessel
15
vein
11
adrenal gland
11
bronchus
11
stomach
10
pituitary gland
10
placenta
9
esophagus
9
gonad
8
bone marrow
6
mouth
6
testis
5
limb
5
lymphoid tissue
5
spinal cord
4
nose
4
small intestine
3
adipose tissue
3
thyroid gland
2
ovary
1
pericardium
1
thymus
1
trachea
Project
113
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
85
hg19
27
GRCh38
month_released!
February, 2021
organ_slims!
nerve
biosample_type!
tissue
BIOSAMPLE
TYPE
153 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
differential activity
target gene predictions
variant allelic effects
candidate regulatory elements
chromatin state
primary cell
pancreatic beta cell
8
3
3
2
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
pancreatic ductal cell
6
3
3
3
1
pancreatic alpha cell
7
3
3
2
+ See 12 more…
cell line
EndoC_BH1
8
8
3
1
1
Panc1
2
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download