Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
41
accessible chromatin
32
differential activity
29
gene expression
25
target gene predictions
6
variant allelic effects
2
candidate regulatory elements
2
chromatin state
1
binding sites
1
caQTL
1
histone modifications
Date released
39
March, 2023
20
January, 2021
18
November, 2021
February, 2021
13
May, 2021
13
September, 2022
12
February, 2024
7
August, 2018
5
October, 2019
5
September, 2023
3
June, 2020
2
February, 2020
1
February, 2023
1
June, 2021
1
October, 2022
Available data
75
bed bed3+
52
tsv
39
bigWig
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bed bed9
Organism
140
Homo sapiens
Biosample type
140
primary cell
132
tissue
31
cell line
3
in vitro differentiated cells
Organ
655
epithelium
227
connective tissue
216
kidney
141
vasculature
119
pancreas
94
blood vessel
72
skin of body
56
liver
41
musculature of body
34
mammary gland
32
extraembryonic component
30
brain
29
lung
25
heart
22
intestine
22
penis
21
artery
18
eye
17
embryo
15
lymphatic vessel
15
vein
11
adrenal gland
11
bronchus
11
stomach
9
esophagus
8
bone element
8
bone marrow
8
prostate gland
7
placenta
6
large intestine
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
3
uterus
2
ovary
1
adipose tissue
1
blood
1
bodily fluid
1
limb
1
pericardium
1
testis
1
thymus
1
trachea
Project
97
AMP
20
T1D
18
ENCODE
5
KPMP
Genome assembly (visualization)
78
hg19
27
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
140 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
differential activity
gene expression
target gene predictions
variant allelic effects
candidate regulatory elements
chromatin state
binding sites
caQTL
histone modifications
primary cell
pancreatic beta cell
8
3
3
2
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
pancreatic ductal cell
6
3
3
3
1
pancreatic alpha cell
7
3
3
2
+ See 18 more…
See all biosamples
Download