Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
52
target gene predictions
44
gene expression
33
differential activity
24
chromatin state
20
candidate regulatory elements
17
eQTL
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
1
binding sites
Date released
65
September, 2022
47
March, 2023
February, 2021
33
May, 2021
27
February, 2024
22
November, 2021
20
January, 2021
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
158
bed bed3+
72
tsv
56
bigWig
20
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
281
Homo sapiens
Biosample type
128
primary cell
119
tissue
31
cell line
3
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
349
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
237
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
191
hg19
75
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
281 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
chromatin state
candidate regulatory elements
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
binding sites
primary cell
pancreatic beta cell
8
2
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
pancreatic ductal cell
6
3
3
3
1
pancreatic alpha cell
7
2
3
3
+ See 14 more…
tissue
islet of Langerhans
6
1
5
3
12
1
2
2
2
1
body of pancreas
5
2
4
4
1
1
3
pancreas
5
5
3
2
1
1
endocrine pancreas
4
4
4
esophagus
3
2
2
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download