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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
48
gene expression
46
target gene predictions
33
differential activity
27
candidate regulatory elements
19
chromatin state
15
eQTL
7
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
50
September, 2022
47
March, 2023
33
May, 2021
32
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
10
March, 2020
8
August, 2021
7
August, 2018
May, 2020
6
October, 2019
5
June, 2020
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
157
bed bed3+
76
tsv
53
bigWig
15
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
277
Homo sapiens
Biosample type
126
primary cell
115
tissue
33
cell line
3
in vitro differentiated cells
Organ
920
epithelium
619
kidney
440
connective tissue
418
brain
365
musculature of body
311
lung
289
intestine
267
pancreas
235
vasculature
232
heart
227
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
182
blood vessel
174
large intestine
150
liver
146
extraembryonic component
119
stomach
105
eye
88
bone element
87
mammary gland
84
small intestine
83
uterus
82
adipose tissue
78
prostate gland
73
adrenal gland
73
placenta
66
artery
64
penis
62
lymph node
58
ureter
50
gonad
48
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
21
lymphatic vessel
21
nerve
19
mouth
19
vein
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
237
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
186
hg19
59
GRCh38
month_released!
January, 2020
May, 2020
BIOSAMPLE
TYPE
277 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
4
11
3
13
1
2
2
2
2
body of pancreas
1
5
8
4
1
3
pancreas
3
5
5
3
1
1
1
endocrine pancreas
4
7
4
urinary bladder
1
2
3
2
+ See 9 more…
cell line
EndoC_BH1
8
8
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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