Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
94
candidate regulatory elements
93
target gene predictions
91
accessible chromatin
69
gene expression
68
chromatin state
33
differential activity
21
variant allelic effects
14
Fine-mapped variants
14
eQTL
12
histone modifications
10
binding sites
2
caQTL
2
sQTL
2
variant to gene
Date released
152
September, 2022
79
February, 2021
47
March, 2023
37
May, 2021
30
February, 2024
28
November, 2021
24
March, 2020
20
January, 2021
17
May, 2020
16
August, 2021
16
January, 2020
13
February, 2020
9
June, 2020
8
October, 2019
7
April, 2019
7
August, 2018
January, 2022
5
November, 2019
4
February, 2023
3
August, 2017
1
January, 2018
1
June, 2021
1
May, 2019
Available data
332
bed bed3+
105
tsv
79
bigWig
59
bed bed9
14
bigBed narrowPeak
12
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
525
Homo sapiens
Biosample type
321
tissue
157
primary cell
43
cell line
4
in vitro differentiated cells
Organ
949
epithelium
651
kidney
454
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
475
AMP
28
ENCODE
20
T1D
2
community
Genome assembly (visualization)
415
hg19
147
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
525 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
variant allelic effects
Fine-mapped variants
eQTL
histone modifications
binding sites
caQTL
sQTL
variant to gene
tissue
heart
37
20
5
3
21
2
1
1
islet of Langerhans
1
6
11
3
1
2
10
1
2
2
2
heart left ventricle
11
7
3
1
8
2
1
body of pancreas
8
5
2
4
1
3
1
pancreas
5
5
5
3
1
1
1
+ See 20 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 22 more…
cell line
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
fibroblast of cardiac tissue
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
cardiac fibroblast
1
See all biosamples
Download