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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
183
candidate regulatory elements
119
target gene predictions
115
accessible chromatin
94
chromatin state
89
differential activity
27
variant allelic effects
14
eQTL
12
binding sites
12
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
269
September, 2022
219
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
25
May, 2020
21
November, 2021
20
January, 2021
19
June, 2020
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
January, 2022
3
August, 2017
2
April, 2019
2
March, 2024
2
November, 2019
2
October, 2022
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
468
bed bed3+
327
tsv
93
bigWig
90
bed bed9
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
924
Homo sapiens
Biosample type
435
primary cell
410
tissue
75
cell line
4
in vitro differentiated cells
Organ
949
epithelium
651
kidney
454
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
741
AMP
140
KPMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
573
hg19
161
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
924 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic ductal cell
3
3
6
3
1
1
2
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
+ See 80 more…
tissue
kidney
7
29
14
10
16
1
1
1
2
right kidney
20
10
1
10
1
islet of Langerhans
11
1
6
3
1
10
2
1
2
2
2
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 26 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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