Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
candidate regulatory elements
88
target gene predictions
75
accessible chromatin
53
chromatin state
50
gene expression
33
differential activity
11
binding sites
11
eQTL
11
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
142
September, 2022
77
February, 2021
47
March, 2023
38
May, 2021
28
February, 2024
24
November, 2021
20
January, 2021
11
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
6
August, 2017
January, 2022
6
May, 2020
6
October, 2019
4
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
296
bed bed3+
78
tsv
60
bigWig
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
445
Homo sapiens
Biosample type
242
tissue
132
primary cell
68
cell line
3
in vitro differentiated cells
Organ
949
epithelium
651
kidney
454
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
399
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
356
hg19
98
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
445 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
2
10
1
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
pancreas
5
5
5
3
1
1
1
+ See 17 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 13 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
Panc1
2
2
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download