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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
72
gene expression
65
target gene predictions
47
candidate regulatory elements
37
differential activity
34
chromatin state
20
histone modifications
18
binding sites
18
eQTL
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
90
September, 2022
57
February, 2021
54
February, 2024
51
March, 2023
36
May, 2021
23
November, 2021
20
January, 2021
19
March, 2020
18
August, 2021
9
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
January, 2022
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
260
bed bed3+
104
tsv
80
bigWig
27
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
428
Homo sapiens
Biosample type
189
primary cell
167
tissue
62
cell line
10
in vitro differentiated cells
Organ
949
epithelium
651
kidney
454
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
383
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
310
hg19
116
GRCh38
2
hg18
month_released!
January, 2022
BIOSAMPLE
TYPE
428 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
13
3
1
1
4
1
2
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 17 more…
tissue
liver
4
1
10
13
1
9
2
1
6
1
islet of Langerhans
6
11
1
3
1
2
10
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
+ See 8 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
Panc1
2
2
1
8988T
1
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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