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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
target gene predictions
77
accessible chromatin
71
candidate regulatory elements
51
binding sites
44
chromatin state
40
gene expression
31
histone modifications
16
eQTL
11
variant allelic effects
3
Fine-mapped variants
1
differential activity
1
pQTL
1
sQTL
Date released
119
September, 2022
105
February, 2021
53
February, 2024
March, 2023
37
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
16
June, 2020
11
August, 2021
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
349
bed bed3+
57
bigWig
38
bed bed9
36
tsv
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
448
Homo sapiens
Biosample type
237
cell line
112
tissue
96
primary cell
3
in vitro differentiated cells
Organ
911
epithelium
652
kidney
466
brain
451
connective tissue
375
musculature of body
311
lung
289
intestine
262
vasculature
255
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
410
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
403
hg19
114
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
448 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
pQTL
sQTL
cell line
K562
23
1
7
2
7
1
EndoC_BH1
1
8
8
1
1
GM12878
8
1
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
2
1
1
2
1
1
+ See 32 more…
tissue
islet of Langerhans
1
6
2
3
11
1
12
1
1
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
1
3
1
1
1
endocrine pancreas
4
7
4
blood
2
+ See 9 more…
primary cell
pancreatic ductal cell
3
6
1
2
2
1
pancreatic beta cell
3
8
2
1
pancreatic alpha cell
3
7
2
1
pancreatic acinar cell
3
6
2
1
pancreatic delta cell
4
5
2
1
+ See 10 more…
in vitro differentiated cells
pancreatic ductal cell
3
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