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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
accessible chromatin
75
target gene predictions
74
candidate regulatory elements
74
gene expression
50
chromatin state
26
binding sites
26
variant allelic effects
20
eQTL
16
differential activity
14
histone modifications
12
Fine-mapped variants
3
caQTL
1
sQTL
Date released
119
September, 2022
80
February, 2021
March, 2023
42
February, 2024
36
May, 2021
35
September, 2023
24
November, 2021
21
March, 2020
21
May, 2020
20
January, 2020
20
January, 2021
10
June, 2020
9
August, 2021
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
4
October, 2022
3
April, 2020
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
322
bed bed3+
95
tsv
88
bigWig
45
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
txt
Organism
492
Homo sapiens
Biosample type
252
primary cell
192
tissue
43
cell line
5
in vitro differentiated cells
Organ
911
epithelium
652
kidney
466
brain
451
connective tissue
375
musculature of body
311
lung
289
intestine
262
vasculature
255
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
410
AMP
35
KPMP
24
ENCODE
20
T1D
3
LungMap
Genome assembly (visualization)
390
hg19
148
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
492 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
variant allelic effects
eQTL
differential activity
histone modifications
Fine-mapped variants
caQTL
sQTL
primary cell
endothelial cell of umbilical vein
2
4
6
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic ductal cell
6
3
2
1
1
2
pancreatic beta cell
8
3
2
1
pancreatic alpha cell
7
3
2
1
+ See 39 more…
tissue
islet of Langerhans
6
1
11
3
2
1
12
1
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
1
3
2
2
3
1
tibial artery
3
2
3
1
3
2
2
3
+ See 15 more…
cell line
EndoC_BH1
8
1
8
1
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 5 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
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