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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
61
target gene predictions
53
candidate regulatory elements
48
gene expression
33
chromatin state
33
differential activity
16
eQTL
9
histone modifications
8
binding sites
7
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
92
September, 2022
49
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
209
bed bed3+
76
tsv
57
bigWig
29
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
344
Homo sapiens
Biosample type
169
tissue
136
primary cell
36
cell line
3
in vitro differentiated cells
Organ
934
epithelium
633
kidney
448
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
302
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
252
hg19
78
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
344 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
1
15
26
14
1
2
1
islet of Langerhans
4
1
11
3
13
1
2
2
2
2
body of pancreas
5
8
2
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
primary cell
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 15 more…
cell line
EndoC_BH1
8
1
8
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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