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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
57
target gene predictions
48
gene expression
44
candidate regulatory elements
33
differential activity
28
chromatin state
15
eQTL
7
histone modifications
7
variant allelic effects
6
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
77
September, 2022
47
March, 2023
42
February, 2021
34
May, 2021
25
February, 2024
20
January, 2021
19
November, 2021
10
March, 2020
8
August, 2021
7
August, 2018
May, 2020
6
October, 2019
5
June, 2020
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
190
bed bed3+
76
tsv
56
bigWig
24
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
319
Homo sapiens
Biosample type
156
tissue
127
primary cell
33
cell line
3
in vitro differentiated cells
Organ
934
epithelium
633
kidney
448
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
278
AMP
20
T1D
19
ENCODE
2
community
Genome assembly (visualization)
228
hg19
71
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
319 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
thymus
1
13
20
11
1
1
islet of Langerhans
4
1
11
3
13
1
2
2
2
2
body of pancreas
5
2
8
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
primary cell
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 13 more…
cell line
EndoC_BH1
8
1
8
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
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