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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
64
accessible chromatin
49
gene expression
48
target gene predictions
33
differential activity
30
candidate regulatory elements
22
chromatin state
15
eQTL
8
binding sites
7
histone modifications
7
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
50
September, 2022
47
March, 2023
38
February, 2021
34
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
10
March, 2020
8
August, 2021
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
5
June, 2020
4
August, 2017
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
169
bed bed3+
77
tsv
55
bigWig
17
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
292
Homo sapiens
Biosample type
144
primary cell
110
tissue
35
cell line
3
in vitro differentiated cells
Organ
934
epithelium
633
kidney
448
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
252
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
200
hg19
63
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
292 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
endothelial cell of umbilical vein
1
4
6
5
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
+ See 13 more…
tissue
islet of Langerhans
4
11
1
3
13
2
1
2
2
2
body of pancreas
2
5
8
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 7 more…
cell line
EndoC_BH1
8
8
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
vein endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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